Sign inSign up

cardiacmodelling/appredict-with-emulators

By cardiacmodelling

Updated about 1 month ago

ApPredict (including chaste-libs and lookup tables).

Image
Machine learning & AI
Data science
1

1.6K

cardiacmodelling/appredict-with-emulators repository overview

ApPredict with lookup tables pre-installed.

This image contains ApPredict and all the lookup tables which were available at build time.

The lookup tables are quite large so the image's compressed size is currently approx. 1.6Gb and can therefore take a few minutes to download on first use.

Built on top of appredict-no-emulators.

Source code

https://github.com/CardiacModelling/appredict-docker/tree/master/appredict-with-emulators

Prerequisites

Docker Container Runtime pre-installed.

(If you're using Singularity rather than Docker you can easily build a Singularity SIF (Singularity Image Format) image from a Docker image, and adapt the corresponding AP-Portal Singularity.sh script)

Install/Run

Documentation available at https://ap-nimbus.readthedocs.io/.

Tags

tagdate
(YYMMDD)
appredict-no-emulatorsChasteApPredictchangelog
1.0.02307211.0.0#f7b6baf#250e593First major release. Includes a minor bugfix in appredict-no-emulators
0.0.102211220.0.9#f7b6baf#250e593Switched to using debian buster based chast-libs. Appredict now has --version argument, which shows versions of dependnacies being used.
0.0.92110150.0.4#682dce0#9599e97Now using factory method to include CellMl files: pre-compiled models, are avalable --model <model_name>. The numbering is kept for backwards-compatibility.
0.0.82010020.0.7#8261429#8d02ac1Updated chaste, Appredict and chaste libs
0.0.72007160.0.6#9c205f0#b9883eaUpdated ApPredict
0.0.62006290.0.5#9c205f0#5311f5fUpdating ApPredict to qNet variability and enhanced messages
Container's ApPredict dir now world-writable
0.0.52005110.0.4(1)#c4f5695#f34b928(1)Updating ApPredict to pre-qNet variability availability
INaL in lookup tables also available
0.0.42004220.0.4#c4f5695#23aba22New appredict-no-emulators
ApPredict now non-native build, with new lookup table availability
0.0.31912190.0.3#3adb96d#727bc85
0.0.21812210.0.2#12cdbe7#0f75df0
0.0.1181220Prototype!

(1) Anomaly! Accidentally overwrote appredict-no-emulators:0.0.4!

Tag summary

Content type

Image

Digest

sha256:aa9376817

Size

2.2 GB

Last updated

about 1 month ago

docker pull cardiacmodelling/appredict-with-emulators