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scitran/apply-canonical-xform

By scitran

•Updated over 8 years ago

Reorient NIfTI data and metadata fields into RAS space by estimating and applying a canonical xform.

Image
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1.2K

scitran/apply-canonical-xform repository overview

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⁠scitran/apply-canonical-xform

Reorient NIfTI data and metadata fields into RAS space by estimating and applying a canonical transform.

This Gear uses a compiled version of the VISTASOFT⁠ function niftiApplyCannonicalXform⁠.

⁠Example Usage
mkdir -p input/nifti && mkdir output
cp <nifti-file.nii.gz> input/nifti
docker run --rm -ti -v `pwd`/input:/flywheel/v0/input -v `pwd`/output:/flywheel/v0/output scitran/apply-canonical-xform

Tag summary

Content type

Image

Digest

Size

823.4 MB

Last updated

almost 10 years ago

docker pull scitran/apply-canonical-xform